The detailed information of tRNA gene sequence


Sequence ID>WENV181371578
Genome IDOFQV01020531
Search identical group
Phylum/Class[OFQV] wastewater metagenome; WWTP Cannobio (Effluent)
Species
Start position on genome 545
End posion on genome 471
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aagatagctt
tRNA gene sequence 
TGCGGGGTGGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCATGTTCGAG
TCATGCCCCCGCAACtc
Downstream region at tRNA end position 
gatgaaaccc
Secondary structure (Cloverleaf model)
>WENV181371578	fMet	CAT
                   t      ACtc gatgaaaccc
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G T A C     A
      C G A        G      | | | | |     G
    C       C G A G       G C A T G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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