The detailed information of tRNA gene sequence


Sequence ID>WENV181373454
Genome IDOFQX01065327
Search identical group
Phylum/Class[OFQX] wastewater metagenome; WWTP Novara (Effluent)
Species
Start position on genome 118
End posion on genome 42
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gtttttttat
tRNA gene sequence 
CGCGGAATAGAGCAGCTAGGTAGCTCGTCGGGCTCATAACCCGAAGGTCACAGGTTCAAA
TCCTGTTTCCGCAACCA
Downstream region at tRNA end position 
acttaattct
Secondary structure (Cloverleaf model)
>WENV181373454	fMet	CAT
                   t      ACCA acttaattct
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     T G T C C     A
      C G A        A      | | | | |     A
    T       C G A G       A C A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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