The detailed information of tRNA gene sequence


Sequence ID>WENV181379307
Genome IDOFRD01000394
Search identical group
Phylum/Class[OFRD] wastewater metagenome; Exp Tend CN 100WW
Species
Start position on genome 16318
End posion on genome 16242
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ggagcgctgg
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGTTAGAGCTGGCCGCTCATAACGGCTAGGTTGCGGGTTCAAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
cgtcgcatcg
Secondary structure (Cloverleaf model)
>WENV181379307	Ile2	CAT
                   g      ACCA cgtcgcatcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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