The detailed information of tRNA gene sequence


Sequence ID>WENV181379414
Genome IDOFRD01001269
Search identical group
Phylum/Class[OFRD] wastewater metagenome; Exp Tend CN 100WW
Species
Start position on genome 4556
End posion on genome 4645
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagccccact
tRNA gene sequence 
GGATCGGTGGATGAGCGGTTTAAGTCACACGCCTGGAAAGCGTGCGAGGGGTAAAACCCT
CCGCGGGTTCGAATCCCGCCTGATCCGCCA
Downstream region at tRNA end position 
gtaaaagaaa
Secondary structure (Cloverleaf model)
>WENV181379414	Ser	GGA
                   t      GCCA gtaaaagaaa
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G + T
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        A     CGAGGGGTAAAACCCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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