The detailed information of tRNA gene sequence


Sequence ID>WENV181379418
Genome IDOFRD01001313
Search identical group
Phylum/Class[OFRD] wastewater metagenome; Exp Tend CN 100WW
Species
Start position on genome 2300
End posion on genome 2216
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctttgagctt
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTAATGGAGCAGATTGCTAATCTGTCGACGAGCAATCGTCGCC
AGGGTTCGAGTCCCTGTCTCTCCGCtt
Downstream region at tRNA end position 
ttttattttg
Secondary structure (Cloverleaf model)
>WENV181379418	Ser	GCT
                   t      GCtt ttttattttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     G T C C C     A
        G A        G      | | | | |     G
      T     G A C C       C A G G G     C
      G       | | |                 T T
      G     A T G G
        T A        A     CGACGAGCAATCGTCGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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