The detailed information of tRNA gene sequence


Sequence ID>WENV181379770
Genome IDOFRD01007994
Search identical group
Phylum/Class[OFRD] wastewater metagenome; Exp Tend CN 100WW
Species
Start position on genome 2180
End posion on genome 2087
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gactctttct
tRNA gene sequence 
TGGAGGTGAAAGGGGTCTGGTGGCCCTCCTCGTCTTCAAAACGAGTGGGATGGGTTTTCT
CGTCTGGTGGGTTCGATTCCTGCCGCCTCCGCCAa
Downstream region at tRNA end position 
agttgggcta
Secondary structure (Cloverleaf model)
>WENV181379770	SeC	TCA
                   t      CCAa agttgggcta
                     T + G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T T
                    A     C G T C C     A
      C T G        A      | + + | |     G
    T       G G G A       G T G G G     C
    G       | | | |                 T T
    G       C C C T
      T G G        C     TGGGATGGGTTTTCTCGTCTG
                    C - G
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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