The detailed information of tRNA gene sequence


Sequence ID>WENV181382435
Genome IDOFRG01001111
Search identical group
Phylum/Class[OFRG] wastewater metagenome; WWTP Verbania (Effluent)
Species
Start position on genome 5489
End posion on genome 5560
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaaactgagt
tRNA gene sequence 
CGGGGTGTAGTATATCGGTAGTATATGTGTTTTGGGAACACAAGGGCAGGGTTCGATTCC
CTGCACCCCGACtc
Downstream region at tRNA end position 
agttttgaag
Secondary structure (Cloverleaf model)
>WENV181382435	Pro	TGG
                   t      ACtc agttttgaag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G T C C C     A
        T A        A      | | | | |     G
      C     T A T G       C A G G G     C
      G     + | | +                 T T
      G     G T A T
        T A        A     AGGG
                    T - A
                    G - C
                    T - A
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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