The detailed information of tRNA gene sequence


Sequence ID>WENV181387251
Genome IDOFRL01068608
Search identical group
Phylum/Class[OFRL] wastewater metagenome; Lake Maggiore Cannobio
Species
Start position on genome 231
End posion on genome 157
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gcgacctgac
tRNA gene sequence 
TGCGGGGTAGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCACTGGTTCAAA
TCCAGTCCCCGCTACtt
Downstream region at tRNA end position 
ttagggtcga
Secondary structure (Cloverleaf model)
>WENV181387251	fMet	CAT
                   c      ACtt ttagggtcga
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G A C C     A
      C G A        A      | | | | |     A
    C       C G A G       A C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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