The detailed information of tRNA gene sequence


Sequence ID>WENV181389139
Genome IDOFRM01088368
Search identical group
Phylum/Class[OFRM] wastewater metagenome; Exp Tend VB 0WW
Species
Start position on genome 515
End posion on genome 424
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcgcctgcc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCAACGTTTTGCTAAATCGTCATACGGTTTACCCCG
TATCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ggaattattt
Secondary structure (Cloverleaf model)
>WENV181389139	Ser	GCT
                   c      GCCA ggaattattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATACGGTTTACCCCGTATC
                    A - T
                    C - G
                    G - C
                    T   T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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