The detailed information of tRNA gene sequence


Sequence ID>W141137540
Genome IDAWHQ01000012
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio parahaemolyticus S163 [AWHQ]
Start position on genome 29362
End posion on genome 29286
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tccctgtagc
tRNA gene sequence 
GCGCCCTTAGCTCAGCTGGATAGAGCACGTCCCTTCTAAGGATGTGGTCATTGGTTCGAA
TCCAATAGGGCGTGCCA
Downstream region at tRNA end position 
tttattctaa
Secondary structure (Cloverleaf model)
>W141137540	Arg	TCT
                   c      GCCA tttattctaa
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T A A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T T G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     TGGTC
                    C - G
                    G + T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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