The detailed information of tRNA gene sequence


Sequence ID>WENV181404352
Genome IDOGCA01000526
Search identical group
Phylum/Class[OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 3384
End posion on genome 3468
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaaaaccgaa
tRNA gene sequence 
GCCGGGGTCGCCTAGCCTGGTAGGGCGCCGGCCTGCTAAGCCGGTGGGGGATTCCCCGCG
CGGGTTCAAATCCCGCCCCCGGCGCta
Downstream region at tRNA end position 
cttccatatt
Secondary structure (Cloverleaf model)
>WENV181404352	Ser	GCT
                   a      GCta cttccatatt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        C      | | | | |     A
    C       T C C G       G C G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGGGGGATTCCCCGC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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