The detailed information of tRNA gene sequence


Sequence ID>WENV181404355
Genome IDOGCA01000609
Search identical group
Phylum/Class[OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 3944
End posion on genome 3870
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
nnnnnnnnag
tRNA gene sequence 
GCCGCCGTAGCTCAGCCTGGTGGAGCGCTGCCCTGGTAAGGCAGAGGTCCCGGGTTCGAA
TCCCGGCGGCGGCTCtt
Downstream region at tRNA end position 
aaggagtttt
Secondary structure (Cloverleaf model)
>WENV181404355	Thr	GGT
                   g      TCtt aaggagtttt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T G        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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