The detailed information of tRNA gene sequence


Sequence ID>WENV181404410
Genome IDOGCA01002086
Search identical group
Phylum/Class[OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 1012
End posion on genome 925
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctttttcgta
tRNA gene sequence 
GGCGAGGTGCCGGAGTGGTCGAACGGGGCGGTCTCGAAAATCGCTGTGGGTTCAAAGCCC
ACCGGGGGTTCGAATCCCTCCCTCGCCGtaa
Downstream region at tRNA end position 
aaggtttaac
Secondary structure (Cloverleaf model)
>WENV181404410	Ser	CGA
                   a      Gtaa aaggtttaac
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTGGGTTCAAAGCCCACC
                    G - C
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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