The detailed information of tRNA gene sequence


Sequence ID>WENV181404420
Genome IDOGCA01002460
Search identical group
Phylum/Class[OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 912
End posion on genome 838
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taatatagca
tRNA gene sequence 
GGCGGCGTAGCTCAGCTGGTTAGAGCGGAGATCTCATAAGTCTCAGGTCGGAGGTTCGAG
TCCTCCCGCCGCCACtt
Downstream region at tRNA end position 
actcctcaag
Secondary structure (Cloverleaf model)
>WENV181404420	Met	CAT
                   a      ACtt actcctcaag
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C C T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G - C
                    A - T
                    G - C
                    A - T
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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