The detailed information of tRNA gene sequence


Sequence ID>WENV181404456
Genome IDOGCA01005020
Search identical group
Phylum/Class[OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 1039
End posion on genome 950
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcttcgtta
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCCGAAGGCGGCTCCTTGCTAAGGAGTTGTAGGGTTTACAGCC
CTACCGCGGGTTCGAATCCCGCCCTCTCCGttt
Downstream region at tRNA end position 
aatccgtttc
Secondary structure (Cloverleaf model)
>WENV181404456	Ser	GCT
                   a      Gttt aatccgtttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TGTAGGGTTTACAGCCCTACC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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