The detailed information of tRNA gene sequence


Sequence ID>WENV181404500
Genome IDOGCA01007610
Search identical group
Phylum/Class[OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 489
End posion on genome 580
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tattattttT
tRNA gene sequence 
GGAGGGGTGACCGAGCGGCCGAAGGTGGGTGATTTGAAATCACCTGTGGGTCTTTAGGGC
CCACCGAGGGTTCGAATCCCTCCCCCTCCGTtt
Downstream region at tRNA end position 
gtaattaggt
Secondary structure (Cloverleaf model)
>WENV181404500	Ser	TGA
                   T      GTtt gtaattaggt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTGGGTCTTTAGGGCCCACC
                    G - C
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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