The detailed information of tRNA gene sequence


Sequence ID>WENV181404524
Genome IDOGCA01009477
Search identical group
Phylum/Class[OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 528
End posion on genome 443
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatttaataT
tRNA gene sequence 
GCCGCGGTGCCCGAGTGGCCCAAGGGGATGGATTGCTAATCCATTCCCCGAAAGGGGGCG
TGGGTTCAAATCCCACCCGCGGCGTtt
Downstream region at tRNA end position 
ataaatgtat
Secondary structure (Cloverleaf model)
>WENV181404524	Ser	GCT
                   T      GTtt ataaatgtat
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C C       G T G G G     C
    G         | | |                 T T
    C       A G G G
      C C A        G     TCCCCGAAAGGGGGC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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