The detailed information of tRNA gene sequence


Sequence ID>WENV181404600
Genome IDOGCA01021635
Search identical group
Phylum/Class[OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 501
End posion on genome 412
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcttcgtta
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCCGAAGGCGGCTCCCTGCTAAGGAGTTGTAGGGTTAACAGCC
CTACCGCGGGTTCGAATCCCGCCCTCTCCGttt
Downstream region at tRNA end position 
aatccgtttc
Secondary structure (Cloverleaf model)
>WENV181404600	Ser	GCT
                   a      Gttt aatccgtttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TGTAGGGTTAACAGCCCTACC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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