The detailed information of tRNA gene sequence


Sequence ID>WENV181404758
Genome IDOGCB01000167
Search identical group
Phylum/Class[OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 5457
End posion on genome 5531
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ataaaccata
tRNA gene sequence 
GCCCCCATCGTCTAGTCAGGTCCAGGATACGGGGTTCTCATCCCCGAGACCCGGGTTCAA
ATCCCGGTGGGGGCAgat
Downstream region at tRNA end position 
tataattttt
Secondary structure (Cloverleaf model)
>WENV181404758	Glu	CTC
                   a      Agat tataattttt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G G C C C     A
    C T G A        C      | | | | |     A
  A         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    T C C A        A     AGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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