The detailed information of tRNA gene sequence


Sequence ID>WENV181404842
Genome IDOGCB01000634
Search identical group
Phylum/Class[OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 6187
End posion on genome 6095
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cccggctcaG
tRNA gene sequence 
GGAGGGGTGCCGGAGCGGTTGAACGGGCCGGTCTCGAAAACCGGTAGGCCCCGCAAGGGG
CCTCGCGGGTTCGAATCCCGCCCCCTCCGCCA
Downstream region at tRNA end position 
aaggcggcct
Secondary structure (Cloverleaf model)
>WENV181404842	Ser	CGA
                   G      GCCA aaggcggcct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G C G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TAGGCCCCGCAAGGGGCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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