The detailed information of tRNA gene sequence


Sequence ID>WENV181404902
Genome IDOGCB01001409
Search identical group
Phylum/Class[OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 2188
End posion on genome 2280
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccaaagccat
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCTAAGGCGGCACCCTGCTAAGGTGCTGCACCGGGAAAACCG
GTGCCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aaaaggcccg
Secondary structure (Cloverleaf model)
>WENV181404902	Ser	GCT
                   t      GCCA aaaaggcccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TGCACCGGGAAAACCGGTGCC
                    G - C
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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