The detailed information of tRNA gene sequence


Sequence ID>WENV181404990
Genome IDOGCB01005022
Search identical group
Phylum/Class[OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 1513
End posion on genome 1598
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatttaataT
tRNA gene sequence 
GCCGCGGTGCCCGAGTGGCCCAAGGGGATGGATTGCTAATCCATTCCCCGAAAGGGGGCG
TGGGTTCAAATCCCACCCGCGGCGTtt
Downstream region at tRNA end position 
ataagtgtat
Secondary structure (Cloverleaf model)
>WENV181404990	Ser	GCT
                   T      GTtt ataagtgtat
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C C       G T G G G     C
    G         | | |                 T T
    C       A G G G
      C C A        G     TCCCCGAAAGGGGGC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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