The detailed information of tRNA gene sequence


Sequence ID>WENV181405033
Genome IDOGCB01006811
Search identical group
Phylum/Class[OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 1366
End posion on genome 1289
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnnnnaggga
tRNA gene sequence 
GGGCCCGTCGTCTAGCCCGGTTAGGACGCCGCCCTTACACGGCGGAGGTCCGGGGTTCGA
ATCCCCGCGGGCCCACCA
Downstream region at tRNA end position 
cctgataaat
Secondary structure (Cloverleaf model)
>WENV181405033	Val	TAC
                   a      ACCA cctgataaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        C      | | | | |     G
  C         T C T G       C G G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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