The detailed information of tRNA gene sequence


Sequence ID>WENV181405063
Genome IDOGCB01009391
Search identical group
Phylum/Class[OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 1009
End posion on genome 938
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cacagcctta
tRNA gene sequence 
GGGGATGTAGCTCAGCGGGAGAGCGCCTGCTTTGCAAGCAGGAGGTCGAGGGTTCAAATC
CCTCCATCTCCAtgc
Downstream region at tRNA end position 
ttacaaggca
Secondary structure (Cloverleaf model)
>WENV181405063	Ala	TGC
                   a      Atgc ttacaaggca
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C T C C C     A
        G A        A      | | | | |     A
      C     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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