The detailed information of tRNA gene sequence


Sequence ID>WENV181405079
Genome IDOGCB01010807
Search identical group
Phylum/Class[OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 314
End posion on genome 401
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctcttctgta
tRNA gene sequence 
GGCGAGGTGCCGGAGTGGCCGAACGGGGCGGTCTCGAAAATCGCTGTGGGTTCAAAGCCC
ACCGGGGGTTCGAATCCCTCCCTCGCCGtaa
Downstream region at tRNA end position 
aaggtttagc
Secondary structure (Cloverleaf model)
>WENV181405079	Ser	CGA
                   a      Gtaa aaggtttagc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    C       A C G G
      C G A        G     TGTGGGTTCAAAGCCCACC
                    G - C
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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