The detailed information of tRNA gene sequence


Sequence ID>WENV181405108
Genome IDOGCB01013410
Search identical group
Phylum/Class[OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 232
End posion on genome 319
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctttttcgta
tRNA gene sequence 
GGCGAGGTGCCGGAGTGGTCGAACGGGGCGGTCTCGAAAATCGCTGTGGGTTCAAAGCCC
ACCGGGGGTTCGAATCCCTCCCTCGCCGtga
Downstream region at tRNA end position 
aaggtttaac
Secondary structure (Cloverleaf model)
>WENV181405108	Ser	CGA
                   a      Gtga aaggtttaac
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTGGGTTCAAAGCCCACC
                    G - C
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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