The detailed information of tRNA gene sequence


Sequence ID>WENV181405180
Genome IDOGCB01022674
Search identical group
Phylum/Class[OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 471
End posion on genome 567
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgaggaaata
tRNA gene sequence 
GGGAGAGCGTGGCAGGCTGGTGCCGCCCCGGGACTTCAAATCCCGTGAGGGGTTGCTCTG
GCAATCCCTGGAGGGTTCGATTCCCTTGCTCTCCCGCta
Downstream region at tRNA end position 
tgttttaata
Secondary structure (Cloverleaf model)
>WENV181405180	SeC	TCA
                   a      GCta tgttttaata
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T T
                    G     T T C C C     A
      C G G        T      + | | | |     G
    T       A C G G       G A G G G     C
    G         | | |                 T T
    G       C G C C
      T G C        C     TGAGGGGTTGCTCTGGCAATCCCTG
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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