The detailed information of tRNA gene sequence


Sequence ID>WENV181405207
Genome IDOGCB01025710
Search identical group
Phylum/Class[OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 469
End posion on genome 543
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
caaacaaagA
tRNA gene sequence 
GCCCAGGTAGCTCAGCGGGCAGAGCACACCCTTGGTAAGGGTGAGGTCGCCGGTTCAAGT
CCGGTCCTGGGCTTaa
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV181405207	Thr	GGT
                   A      TTaa nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T G G C C     A
      C G A        A      + | | | |     A
    G       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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