The detailed information of tRNA gene sequence


Sequence ID>WENV181405336
Genome IDOGCE01000003
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 42649
End posion on genome 42725
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gactccgctg
tRNA gene sequence 
CGGGGAGTAGCGCAGCCCGGTAGCGCACCTCGTTCGGGACGAGGGGGTCGCTGGTTCAAA
TCCAGTCTCCCCGACCA
Downstream region at tRNA end position 
tagggccggc
Secondary structure (Cloverleaf model)
>WENV181405336	Pro	CGG
                   g      ACCA tagggccggc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G A C C     A
      C G A        A      + | | | |     A
    C       C G C G       G C T G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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