The detailed information of tRNA gene sequence


Sequence ID>WENV181405348
Genome IDOGCE01000008
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 30402
End posion on genome 30327
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position
cattttatga
tRNA gene sequence
GGGCCCGTCGTCTAGCCCGGTTAGGACGCCGCCCTCACACGGCGGAGGTCCGGGGTTCAA
ATCCCCGCGGGCCCACta
Downstream region at tRNA end position
agatattatt
Secondary structure (Cloverleaf model)
>WENV181405348	Val	CAC
                   a      ACta agatattatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        C      | | | | |     A
  C         T C T G       C G G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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