The detailed information of tRNA gene sequence


Sequence ID>WENV181405371
Genome IDOGCE01000044
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 37068
End posion on genome 37160
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cccggctcaG
tRNA gene sequence 
GGAGGGGTGCCGGAGCGGTTGAACGGGCCGGTCTCGAAAACCGGTAGGCCCCGCAAGGGG
TCTCGCGGGTTCGAATCCCGCCCCCTCCGCCA
Downstream region at tRNA end position 
aaggcggccc
Secondary structure (Cloverleaf model)
>WENV181405371	Ser	CGA
                   G      GCCA aaggcggccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G C G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TAGGCCCCGCAAGGGGTCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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