The detailed information of tRNA gene sequence


Sequence ID>WENV181405456
Genome IDOGCE01000141
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 27470
End posion on genome 27546
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tggcatatgt
tRNA gene sequence 
GGGCCCGTAGCTCAGCCTGGTGGAGCGGCGGGCTCTTAACCCGTAGGTCCCGGGTTCAAA
TCCCGGCGGGCCCGCCA
Downstream region at tRNA end position 
caatgccggg
Secondary structure (Cloverleaf model)
>WENV181405456	Lys	CTT
                   t      GCCA caatgccggg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T G        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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