The detailed information of tRNA gene sequence


Sequence ID>WENV181405463
Genome IDOGCE01000150
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 27242
End posion on genome 27319
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atctaactgg
tRNA gene sequence 
GGGCCCGTCGTCTAGCCTGGATAGGACGCCGCCCTCACACGGCGGAGGTCCGGGGTTCAA
ATCCCCGCGGGCCCACCA
Downstream region at tRNA end position 
cccnnnnnnn
Secondary structure (Cloverleaf model)
>WENV181405463	Val	CAC
                   g      ACCA cccnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C G G G G     C
  G         + | | |                 T T
  G         G G A C
    A T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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