The detailed information of tRNA gene sequence


Sequence ID>WENV181405498
Genome IDOGCE01000206
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 5585
End posion on genome 5508
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ggtcctgcgc
tRNA gene sequence 
GGGCCCGTAGTCTAGCCCGGTTAGGACGCCGCCCTTACGAGGCGGAGGTCCGGGGTTCAA
ATCCCCGCGGGCCCACCA
Downstream region at tRNA end position 
agatcttcac
Secondary structure (Cloverleaf model)
>WENV181405498	Val	TAC
                   c      ACCA agatcttcac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        A      | | | | |     A
  C         T C T G       C G G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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