The detailed information of tRNA gene sequence


Sequence ID>WENV181405499
Genome IDOGCE01000207
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 20720
End posion on genome 20646
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaataaatac
tRNA gene sequence 
GCCCCCGTCGTCTAGTCAGGTCTAGGATATAGGGTTTTCGTCCCTATGACCCGGGTTCAA
ATCCCGGCGGGGGCAaaa
Downstream region at tRNA end position 
ttaattaaca
Secondary structure (Cloverleaf model)
>WENV181405499	Glu	TTC
                   c      Aaaa ttaattaaca
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C T G A        C      | | | | |     A
  A         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    T C T A        A     TGAC
                    T - A
                    A - T
                    G - C
                    G - C
                    G - C
                  T       T
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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