The detailed information of tRNA gene sequence


Sequence ID>WENV181405551
Genome IDOGCE01000339
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 6608
End posion on genome 6532
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttttgcgcgc
tRNA gene sequence 
CGGGGAGTAGCGCAGCCTGGTAGCGCACACGCTTGGGGTGCGTGTGGTCGTCGGTTCAAA
TCCGGCCTCCCCGACCA
Downstream region at tRNA end position 
aaaaccccgc
Secondary structure (Cloverleaf model)
>WENV181405551	Pro	GGG
                   c      ACCA aaaaccccgc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | + | | |     A
    C       C G C G       G T C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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