The detailed information of tRNA gene sequence


Sequence ID>WENV181405555
Genome IDOGCE01000346
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 8905
End posion on genome 8978
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ggggcagaac
tRNA gene sequence 
AGCGGGGTAGGGCAGCCAGGTAGCCCGCGGGGCTCATAACCCCGAGGTCGGTGGTTCAAA
TCCACCCCCCGCTAtca
Downstream region at tRNA end position 
gatccccgcc
Secondary structure (Cloverleaf model)
>WENV181405555	fMet	CAT
                   c      Atca gatccccgcc
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C A C C     A
      C G A        A      | | | | |     A
    C       C G G G       G G T G G     C
    A       | | | |                 T T
    G       G C C C
      G T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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