The detailed information of tRNA gene sequence


Sequence ID>WENV181405562
Genome IDOGCE01000374
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 11200
End posion on genome 11286
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taataaagta
tRNA gene sequence 
GCCGGGGTCGCCTAGCCTGGTAGGGCGCCGGCCTGCTAAGCCGGTGGGGGAAACCCCGCG
CGGGTTCAAATCCCGCCCCCGGCGCCA
Downstream region at tRNA end position 
catctaccga
Secondary structure (Cloverleaf model)
>WENV181405562	Ser	GCT
                   a      GCCA catctaccga
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        C      | | | | |     A
    C       T C C G       G C G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGGGGGAAACCCCGC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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