The detailed information of tRNA gene sequence


Sequence ID>WENV181405567
Genome IDOGCE01000386
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 1608
End posion on genome 1684
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
taactatggt
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGAAGAGCGCTCGGTTGGCATCCGAGAGGACCCGGGTTCAAA
TCCCGGCCGGTCCACCA
Downstream region at tRNA end position 
ataacatctt
Secondary structure (Cloverleaf model)
>WENV181405567	Ala	GGC
                   t      ACCA ataacatctt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G A A        G     AGGAC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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