The detailed information of tRNA gene sequence


Sequence ID>WENV181405720
Genome IDOGCE01001742
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 1170
End posion on genome 1254
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atataaatat
tRNA gene sequence 
GCCGCGGTGCCCGAGCGGACAAAGGGGTATGGCTCGAGACCATATCCCCGAAAGGGGGCG
TGGGTTCAAATCCCACCCGCGGCGCtt
Downstream region at tRNA end position 
ataaaaattt
Secondary structure (Cloverleaf model)
>WENV181405720	Ser	CGA
                   t      GCtt ataaaaattt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C C       G T G G G     C
    G         | | |                 T T
    A       A G G G
      C A A        G     TCCCCGAAAGGGGGC
                    T - A
                    A - T
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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