The detailed information of tRNA gene sequence


Sequence ID>WENV181405722
Genome IDOGCE01001779
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 1428
End posion on genome 1358
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttatttttaa
tRNA gene sequence 
GGGACCGTAGGCTAGTGGTAGGCTACTGGGTTTGGGTCCCAGTGATCGGGGTTCGAATCC
CCGCGGTCCCAttt
Downstream region at tRNA end position 
aaaatttttt
Secondary structure (Cloverleaf model)
>WENV181405722	Pro	TGG
                   a      Attt aaaatttttt
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
        G A        A      | | | | |     G
      T     T C G G       C G G G G     C
      G     + | | +                 T T
      G     G G C T
        T A        A     TGAT
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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