The detailed information of tRNA gene sequence


Sequence ID>WENV181405742
Genome IDOGCE01002094
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 5129
End posion on genome 5059
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aagagtttta
tRNA gene sequence 
GGGCCCGTAGTCTAGTGGCAGGACGGTGGGCTCCAGACCCATTGACGGGGGTTCGAATCC
CCCCGGGCCCAaga
Downstream region at tRNA end position 
ccagaagtta
Secondary structure (Cloverleaf model)
>WENV181405742	Trp	CCA
                   a      Aaga ccagaagtta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
        G A        A      | | | | |     G
      T     T C T G       G G G G G     C
      G     + | | |                 T T
      G     G G A C
        C A        G     TGAC
                    G + T
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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