The detailed information of tRNA gene sequence


Sequence ID>WENV181405763
Genome IDOGCE01002523
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 4464
End posion on genome 4378
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnncg
tRNA gene sequence 
GCCGGGGTGGCCGAGCGGCCCAAGGCGCGGGACTGGAGATCCCGTCCCCGTCAAGGGGGC
GTGGGTTCAAATCCCACCCCCGGCGCCt
Downstream region at tRNA end position 
ttcccctctt
Secondary structure (Cloverleaf model)
>WENV181405763	Ser	GGA
                   g      GCCt ttcccctctt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      C C A        G     TCCCCGTCAAGGGGGC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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