The detailed information of tRNA gene sequence


Sequence ID>WENV181405782
Genome IDOGCE01003499
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 3029
End posion on genome 2942
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctctcctgta
tRNA gene sequence 
GGCGAGGTGCCGGAGTGGCCGAACGGGGCGGTCTCGAAAATCGCTGTGGGTTCAAAGCCC
ACCGAGGGTTCGAATCCCTCCCTCGCCGtaa
Downstream region at tRNA end position 
aaggtttaac
Secondary structure (Cloverleaf model)
>WENV181405782	Ser	CGA
                   a      Gtaa aaggtttaac
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G         | | |                 T T
    C       A C G G
      C G A        G     TGTGGGTTCAAAGCCCACC
                    G - C
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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