The detailed information of tRNA gene sequence


Sequence ID>WENV181405815
Genome IDOGCE01004497
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 2838
End posion on genome 2766
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
CGGGGTGTGGCGCAGGAGGAAGCGCGCTGGCATGGGGGGCCAGAGGTCACGGGTTCAAGT
CCCGTCACCCCGAttt
Downstream region at tRNA end position 
taaatctaaa
Secondary structure (Cloverleaf model)
>WENV181405815	Pro	GGG
                   n      Attt taaatctaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      G G A        G      | | | | |     A
    A       C G C G       A C G G G     C
    G       | | | |                 T T
    G       G C G C
      A A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  A       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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