The detailed information of tRNA gene sequence


Sequence ID>WENV181405817
Genome IDOGCE01004605
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 496
End posion on genome 403
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attattagta
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCCGAAGGTGCAGCACTGGAAATGCTGTGTGCGGGTTAAACCC
CGCACCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aaaagatatg
Secondary structure (Cloverleaf model)
>WENV181405817	Ser	GGA
                   a      GCCA aaaagatatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G C G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTGCGGGTTAAACCCCGCACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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