The detailed information of tRNA gene sequence


Sequence ID>WENV181405902
Genome IDOGCE01010090
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 85
End posion on genome -1
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatttaataT
tRNA gene sequence 
GCCGCGGTGCCCGAGTGGCCCAAGGGGATGGATTGCTAATCCATTCCCCGAAAGGGGGCG
TGGGTTCAAATCCCACCCGCGGCGNNn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV181405902	Ser	GCT
                   T      GNNn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C C       G T G G G     C
    G         | | |                 T T
    C       A G G G
      C C A        G     TCCCCGAAAGGGGGC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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