The detailed information of tRNA gene sequence


Sequence ID>WENV181405941
Genome IDOGCE01013472
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 487
End posion on genome 560
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atatataagT
tRNA gene sequence 
GGGTGCGTAGCTCAATGGCAGAGCGGGCGGCTCATAACCGCCCGGTTGGGGGTTCGAGTC
CTCCCGCACCCATtt
Downstream region at tRNA end position 
ctagcttaaa
Secondary structure (Cloverleaf model)
>WENV181405941	Met	CAT
                   T      ATtt ctagcttaaa
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C          T G
                    T     C C T C C     A
        A A        A      | | + | |     G
      T     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     CGGTT
                    G - C
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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