The detailed information of tRNA gene sequence


Sequence ID>WENV181405990
Genome IDOGCE01017921
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 353
End posion on genome 424
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cacagcctta
tRNA gene sequence 
GGGGATGTAGCTCAGCGGGAGAGCGCCTGCTTTGCAAGCAGGAGGTCGAGGGTTCAAATC
CCTCCATCTCCAtgc
Downstream region at tRNA end position 
ttacaaggca
Secondary structure (Cloverleaf model)
>WENV181405990	Ala	TGC
                   a      Atgc ttacaaggca
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C T C C C     A
        G A        A      | | | | |     A
      C     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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