The detailed information of tRNA gene sequence


Sequence ID>WENV181406001
Genome IDOGCE01018876
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 593
End posion on genome 669
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
cggtctgccg
tRNA gene sequence 
GCGGCCGTAGTCTAGCCTGGTTCAGGACGGCGGCTTGCCAAGCCGTTGATCCCGGGTTCG
AATCCCGGCCGCCGCACta
Downstream region at tRNA end position 
tgtctctgcc
Secondary structure (Cloverleaf model)
>WENV181406001	Gly	GCC
                   g      ACta tgtctctgcc
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     C   C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     G
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    T T C A        G     TGATC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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